The detailed information of tRNA gene sequence


Sequence ID>WENV11100447
Genome IDAERA01008405
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 350
End posion on genome 426
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccctcacggt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
gtgacgcgaa
Secondary structure (Cloverleaf model)
>WENV11100447	Pro	CGG
                   t      ACCA gtgacgcgaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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