The detailed information of tRNA gene sequence


Sequence ID>WENV11100522
Genome IDAERA01018814
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 922
End posion on genome 1011
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttccgcacca
tRNA gene sequence 
CGGAGGGGTGGCCGAGTGGACGAAGGCGCTGGTCTCGAAAACCAGTAGAGTCGTAAGGCT
CTCGTGGGTTCAAATCCCACCCCTCCGCCAg
Downstream region at tRNA end position 
ccagaaaaca
Secondary structure (Cloverleaf model)
>WENV11100522	Ser	CGA
                   a      CCAg ccagaaaaca
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     C A C C C     A
    T G A G        T      | | | | |     A
  G         C C G G       G T G G G     C
  G           |   |                 T T
  A         A G G C
    C G A          G     TAGAGTCGTAAGGCTCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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