The detailed information of tRNA gene sequence


Sequence ID>WENV11100560
Genome IDAERA01024097
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 429
End posion on genome 504
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcgctcttgt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCGGGAGTTCGATC
CTCCCTGGCTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV11100560	Ala	CGC
                   t      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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