The detailed information of tRNA gene sequence


Sequence ID>WENV11100593
Genome IDAERA01031702
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 31482
End posion on genome 31408
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctttttttt
tRNA gene sequence 
CGGGACGTAGCTCAGCTCGGTAGAGTACACGTCTGGGGGGCGTGTGGTCGCTGGTTCAAA
TCCAGTCGTCCCGACtc
Downstream region at tRNA end position 
cgctcaccgt
Secondary structure (Cloverleaf model)
>WENV11100593	Pro	GGG
                   t      ACtc cgctcaccgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C T G G     C
    C       | | | +                 T T
    G       G A G T
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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