The detailed information of tRNA gene sequence


Sequence ID>WENV11100618
Genome IDAERA01036251
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 57456
End posion on genome 57532
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggatcacgtt
tRNA gene sequence 
TGGTGCGTAGTTCAATTGGCTAGAATGACGGTCTCCAAAACCGTAGGCTATGGGTTCGAA
TCCCGTCGCACCAGCTA
Downstream region at tRNA end position 
aataaatcta
Secondary structure (Cloverleaf model)
>WENV11100618	Trp	CCA
                   t      GCTA aataaatcta
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T A A        A      | + | | |     G
    T       C T T G       A T G G G     C
    G       | | | +                 T T
    G       G A A T
      C T A        G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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