The detailed information of tRNA gene sequence


Sequence ID>WENV11100757
Genome IDAEWW01025307
Search identical group
Phylum/Class[AEWW] ant fungus garden metagenome; Atta cephalotes fungus garden
Species
Start position on genome 146
End posion on genome 235
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgattatat
tRNA gene sequence 
AGAGAGTTGGATGAGAGGCTTAAGTCGCTTCCCTGCTAAGGAAGTGTGGGATTAGTTCCA
CCGAGGGTTCGAATCCCTCACTCTCTGCCA
Downstream region at tRNA end position 
cattaacgat
Secondary structure (Cloverleaf model)
>WENV11100757	Ser	GCT
                   t      GCCA cattaacgat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    C       A G T C
      T T A        G     TGTGGGATTAGTTCCACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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