The detailed information of tRNA gene sequence


Sequence ID>WENV11100878
Genome IDAFSR01000121
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 7144
End posion on genome 7055
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
acagctgacT
tRNA gene sequence 
GGAAGGGTGACAGAGTGGTTGATTGTGACGCTCTCGAAAAGCGTTGTGACTGCAAGGTCA
CCGTGGGTTCGAATCCCACCCCTTCCGTCt
Downstream region at tRNA end position 
tcaggcatac
Secondary structure (Cloverleaf model)
>WENV11100878	Pseudo	CGA
                   T      GTCt tcaggcatac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      T G A        G     TGTGACTGCAAGGTCACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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