The detailed information of tRNA gene sequence


Sequence ID>WENV11100947
Genome IDAFSR01001019
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3964
End posion on genome 4038
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacggtcaac
tRNA gene sequence 
GGGCGGTTAGTCTCAGTTGGTAGAGCACTCGTTTCACACGCGAGGGGTCACAGGTTCGAG
TCCTGTACCGCCCACtc
Downstream region at tRNA end position 
cagctttcct
Secondary structure (Cloverleaf model)
>WENV11100947	Val	CAC
                   c      ACtc cagctttcct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      G A C        A      | | | | |     G
    T       T C T G       A C A G G     C
    T       +   + |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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