The detailed information of tRNA gene sequence


Sequence ID>C11106404
Genome IDFP565809
Search identical group
Phylum/ClassBacillota
SpeciesAcetoanaerobium sticklandii DSM 519 [FP565809]
Start position on genome 1515124
End posion on genome 1515028
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgtttgaat
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGTCCTCTGGTCTTCAAAACCAGTTTGAGGGGTTAGGAG
CCTCTTAGGTAGGTTCGATTCCTACATACTCCCGCCA
Downstream region at tRNA end position 
aaaattattg
Secondary structure (Cloverleaf model)
>C11106404	SeC	TCA
                   t      GCCA aaaattattg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A T C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T A G G     C
    G       + + | |                 T T
    T       G T C C
      G T          T     TTTGAGGGGTTAGGAGCCTCTTAG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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