The detailed information of tRNA gene sequence


Sequence ID>C11109326
Genome IDCP002858
Search identical group
Phylum/ClassDeferribacterota
SpeciesFlexistipes sinusarabici DSM 4947 [CP002858]
Start position on genome 2454136
End posion on genome 2454040
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attgcaataa
tRNA gene sequence 
GGGAGTGGTTGGGCAGCTGGTGCGCCCCGCGGCCTTCAAAGCCGACTGTCCCGCCTGTTG
GGCGGGAGGTAGGTTCGATTCCTACACACTCCCGCCA
Downstream region at tRNA end position 
aatttatcag
Secondary structure (Cloverleaf model)
>C11109326	SeC	TCA
                   a      GCCA aatttatcag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    T     C A T C C     A
      C G A        T      | | | | |     G
    T       C G G G       G T A G G     C
    G       | | | |                 T T
    G       G C C C
      T G C        C     CTGTCCCGCCTGTTGGGCGGGAG
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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