The detailed information of tRNA gene sequence


Sequence ID>C11114332
Genome IDCP002830
Search identical group
Phylum/ClassMyxococcota
SpeciesCorallococcus macrosporus HW-1 [CP002830]
Start position on genome 7479214
End posion on genome 7479312
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgcagac
tRNA gene sequence 
GGTAGGGCCTCCGGACCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGAGGGGCGCCGAGA
GGCGTCCCTGGCGAGTTCGATTCCCGTGCCCTACCGCCA
Downstream region at tRNA end position 
atacttccaa
Secondary structure (Cloverleaf model)
>C11114332	SeC	TCA
                   c      GCCA atacttccaa
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    C     T G C C C     A
      C C A        T      + | |   |     G
    T       G G C C       G C G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGGGGCGCCGAGAGGCGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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