The detailed information of tRNA gene sequence


Sequence ID>C11122840
Genome IDCP002690
Search identical group
Phylum/ClassThermodesulfobiota
SpeciesThermodesulfobium narugense DSM 14796 [CP002690]
Start position on genome 245597
End posion on genome 245690
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatctgtt
tRNA gene sequence 
GGGAGAGTATGTGTCCTGGTGGATGCCGTGGCCTTCAAAGCCATTGTGGGGTCGAAAGGC
TCCTGGTGGGTTCAATTCCCTCACTCTCCCGCCA
Downstream region at tRNA end position 
aaatttaatg
Secondary structure (Cloverleaf model)
>C11122840	SeC	TCA
                   t      GCCA aaatttaatg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    A     C T C C C     A
      T C C        T      |   | | |     A
    G       T G T G       G T G G G     C
    G       | + + |                 T T
    T       A T G C
      G G          C     TGTGGGGTCGAAAGGCTCCTG
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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