The detailed information of tRNA gene sequence


Sequence ID>C11300116
Genome IDAP010888
Search identical group
Phylum/ClassActinomycetota
SpeciesBifidobacterium longum subsp. longum JCM 1217 [AP010888]
Start position on genome 1123409
End posion on genome 1123335
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgctccacat
tRNA gene sequence 
GCGTCGGTAGCTTAACGGCAGAGTACCGGTCTCCAAAACCGGTGGGTGTGAGGTCGAGAC
TCACCCGACGCGCCA
Downstream region at tRNA end position 
ggacggtatc
Secondary structure (Cloverleaf model)
>C11300116	Trp	CCA
                   t      GCCA ggacggtatc
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          A G
                    T     C A C T C     A
        A A        A      | | | | |     G
      C     T T C G       G T G A G     C
      G     + | | +                 G T
      G     G A G T
        C A        A     TGGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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