The detailed information of tRNA gene sequence


Sequence ID>WENV11101216
Genome IDAFSR01006636
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 10698
End posion on genome 10789
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgttagcgt
tRNA gene sequence 
GGAGCGGTGCCCGAGTGGCTGAAGGGACACGACTGGAAATCGTGTAGGCTCCGAAAGGGG
TCTCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tccttaacgc
Secondary structure (Cloverleaf model)
>WENV11101216	Ser	GGA
                   t      GCCA tccttaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     TAGGCTCCGAAAGGGGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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