The detailed information of tRNA gene sequence


Sequence ID>WENV11101259
Genome IDAFSR01007791
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2306
End posion on genome 2218
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatgccccT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGCTTGACTCGAAATCAAGTTTGGGGTTACACCCA
ACGGGGGTTCGAATCCCCCCCTCTCCGTat
Downstream region at tRNA end position 
ccttagcttc
Secondary structure (Cloverleaf model)
>WENV11101259	Ser	CGA
                   T      GTat ccttagcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTGGGGTTACACCCAAC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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