The detailed information of tRNA gene sequence


Sequence ID>C11300461
Genome IDCP002868
Search identical group
Phylum/ClassSpirochaetota
SpeciesGracilinema caldarium DSM 7334 [CP002868]
Start position on genome 1260476
End posion on genome 1260405
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
catgattttt
tRNA gene sequence 
GCGGGAATAGCTCAGTGGTAGAGCGCCACCTTGCCAAGGTGGATGTCGCGGGTCCGACTC
CCGTTTCCCGCTttt
Downstream region at tRNA end position 
aaggactatc
Secondary structure (Cloverleaf model)
>C11300461	Gly	GCC
                   t      Tttt aaggactatc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T C
      G     G A G C
        T A        G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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