The detailed information of tRNA gene sequence


Sequence ID>WENV11101329
Genome IDAGBE01001547
Search identical group
Phylum/ClassMarine metagenome, Gulf of Maine surface waters
Species
Start position on genome 1409
End posion on genome 1323
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcataattat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTGAGATTGCTAATTTCATGTTCGCAAGAACTCG
TGGGTTCGAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV11101329	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     G
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    G - C
                    A - T
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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