The detailed information of tRNA gene sequence


Sequence ID>WENV11101342
Genome IDAGBE01001901
Search identical group
Phylum/ClassMarine metagenome, Gulf of Maine surface waters
Species
Start position on genome 850
End posion on genome 757
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taaattaatc
tRNA gene sequence 
GGACTCGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGAAGAAATTCCC
GCAAAGGTCGTGGGTTCAAATCCCATCGGGTCCAtta
Downstream region at tRNA end position 
ttttaattta
Secondary structure (Cloverleaf model)
>WENV11101342	Val	CAC
                   c      Atta ttttaattta
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGAAGAAATTCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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