The detailed information of tRNA gene sequence


Sequence ID>WENV11101354
Genome IDAGBE01001998
Search identical group
Phylum/ClassMarine metagenome, Gulf of Maine surface waters
Species
Start position on genome 17396
End posion on genome 17482
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttaattat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCCGGTAGGGCGTGAGATTGCTAATTTCATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV11101354	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    C       T C C G       G T G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    G - C
                    A - T
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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