The detailed information of tRNA gene sequence


Sequence ID>WENV11101395
Genome IDAGBE01002169
Search identical group
Phylum/ClassMarine metagenome, Gulf of Maine surface waters
Species
Start position on genome 2500
End posion on genome 2406
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caaataattt
tRNA gene sequence 
GGACTGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGAAGAAATTCCC
GCAAAGGTCGTGGGTTCAAATCCCATCCGGTCCACtt
Downstream region at tRNA end position 
accattattc
Secondary structure (Cloverleaf model)
>WENV11101395	Val	CAC
                   t      ACtt accattattc
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGAAGAAATTCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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