The detailed information of tRNA gene sequence


Sequence ID>C11200009
Genome IDCP002745
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCollimonas fungivorans Ter331 [CP002745]
Start position on genome 959796
End posion on genome 959701
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccataaccga
tRNA gene sequence 
GGAAGGCACACGTATCCGGTGATGCGGCCGGGCTTCAAACCCGGTGGGGGGCGCCAGTCG
CTCCCGGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
atcagcttat
Secondary structure (Cloverleaf model)
>C11200009	SeC	TCA
                   a      GCCA atcagcttat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    C     C G T C C     A
      C C T        A      | + | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G A          G     TGGGGGGCGCCAGTCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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