The detailed information of tRNA gene sequence


Sequence ID>C11200014
Genome IDAP012211
Search identical group
Phylum/ClassActinomycetota
SpeciesEggerthella sp. YY7918 [AP012211]
Start position on genome 1484723
End posion on genome 1484819
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcgcttctgt
tRNA gene sequence 
GGAGATGGATGGGTCCTGGTGGACCCCGCGGCCTTCAAAGCCGTCGTGAGGCGTGCAGAA
CGTCTCGGGTGTGTTCGATTCGCACGCATCTCCGCCA
Downstream region at tRNA end position 
ccgattatca
Secondary structure (Cloverleaf model)
>C11200014	SeC	TCA
                   t      GCCA ccgattatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     G   G          T T
                    A     C A C G C     A
      T C C        T      | | | + |     G
    G       T G G G       G T G T G     C
    G       | | | |                 T T
    T       A C C C
      G G          C     CGTGAGGCGTGCAGAACGTCTCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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