The detailed information of tRNA gene sequence


Sequence ID>C11200016
Genome IDFQ670179
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter felis ATCC 49179 [FQ670179]
Start position on genome 420556
End posion on genome 420650
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatgccagc
tRNA gene sequence 
GGAGAGCGAGCATGGCTGGTGCGTGCCTTGGGCTTCAAACCCAAAGAGCGTTTAGGTGTC
CTAAGCGTTGCAAAGTTCGATTCTTTGGCTCTCTTgcc
Downstream region at tRNA end position 
cttaaaggat
Secondary structure (Cloverleaf model)
>C11200016	SeC	TCA
                   c      Tgcc cttaaaggat
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T T
                    G     G T T T C     A
      C G G        A      | | | | |     G
    T       T A C G       C A A A G     C
    G       + | | |                 T T
    G       G T G C
      T G C        C     AGAGCGTTTAGGTGTCCTAAGCGTTG
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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