The detailed information of tRNA gene sequence


Sequence ID>WENV11101475
Genome IDAGFS01031096
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 107
End posion on genome 21
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataaaggagt
tRNA gene sequence 
GGAGCCATGGCAGAGTGGTAATGCAGCGGACTCGAAATCCGTCGAACCGTGTAAAGCGGC
GCAGGGGTTCAAATCCTCTTGACTCCTttt
Downstream region at tRNA end position 
ataaatggat
Secondary structure (Cloverleaf model)
>WENV11101475	Ser	CGA
                   t      Tttt ataaatggat
                     G - C
                     G - C
                     A - T
                     G - C
                     C   A
                     C - G
                     A - T          T A
                    T     T C T C C     A
        G A        G      | | + | |     A
      T     G A C G       A G G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGAACCGTGTAAAGCGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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