The detailed information of tRNA gene sequence


Sequence ID>WENV11101604
Genome IDAGFS01075966
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 1996
End posion on genome 1902
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atgcaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGACGCCAGCGT
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaaatgccct
Secondary structure (Cloverleaf model)
>WENV11101604	SeC(p)	TCA
                   c      GCCA aaaatgccct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGACGCCAGCGTTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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