The detailed information of tRNA gene sequence


Sequence ID>C11100006
Genome IDCP002902
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 [CP002902]
Start position on genome 1085118
End posion on genome 1085207
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttgtcatgt
tRNA gene sequence 
GGAGAGGTGGGCGAGTGGTTGAAGTCAGCGGTCTTGAAAACCGCCGTGTCCGCAAGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
acaaactcaa
Secondary structure (Cloverleaf model)
>C11100006	Ser	TGA
                   t      GCCA acaaactcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C G G       G T G G G     C
    G         | + |                 T T
    T       A G T C
      T G A        A     CGTGTCCGCAAGGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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