The detailed information of tRNA gene sequence


Sequence ID>C11100017
Genome IDCP002902
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 [CP002902]
Start position on genome 1412402
End posion on genome 1412477
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gattccacgc
tRNA gene sequence 
AGGGGCGTAGTTCAGCTGGTAGAACGGCGGTCTCCAAAACCGCATGTCGTGGGTTCGAAT
CCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
tttttcccct
Secondary structure (Cloverleaf model)
>C11100017	Trp	CCA
                   c      GCCA tttttcccct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + + | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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