The detailed information of tRNA gene sequence


Sequence ID>C11100030
Genome IDCP002902
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 [CP002902]
Start position on genome 2703119
End posion on genome 2703043
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaagcgcaa
tRNA gene sequence 
GGGCCCATAGCTCAGTCGGTCAGAGCGGCCGGCTCATAACCGGTTGGTCCCAGGTTCGAG
CCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
cgggtgcagg
Secondary structure (Cloverleaf model)
>C11100030	Met	CAT
                   a      ACCA cgggtgcagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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