The detailed information of tRNA gene sequence


Sequence ID>C11100036
Genome IDCP002902
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 [CP002902]
Start position on genome 2228941
End posion on genome 2228868
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcggcctcat
tRNA gene sequence 
GGCGCCGTAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTCATCGCCGGTTCGAATCC
GGCCGGCGCCTCCA
Downstream region at tRNA end position 
ggtgaaaaag
Secondary structure (Cloverleaf model)
>C11100036	Cys	GCA
                   t      TCCA ggtgaaaaag
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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