The detailed information of tRNA gene sequence


Sequence ID>WENV11101758
Genome IDAGFS01123439
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 101
End posion on genome 195
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atgcaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGACGCCAGCGT
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaaattcatt
Secondary structure (Cloverleaf model)
>WENV11101758	SeC(p)	TCA
                   c      GCCA aaaattcatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGACGCCAGCGTTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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