The detailed information of tRNA gene sequence


Sequence ID>WENV11101780
Genome IDAGFS01132137
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 3
End posion on genome 97
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnngc
tRNA gene sequence 
GGAAGGTCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCAGATGGGACCGCCAGCGG
CCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatttacat
Secondary structure (Cloverleaf model)
>WENV11101780	SeC(p)	TCA
                   c      GCCA aaatttacat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     ATGGGACCGCCAGCGGCCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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