The detailed information of tRNA gene sequence


Sequence ID>C11100169
Genome IDCP002521
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParacidovorax avenae ATCC 19860 [CP002521]
Start position on genome 2212482
End posion on genome 2212393
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgggcttcc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAATCCCCA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gatgcaaagc
Secondary structure (Cloverleaf model)
>C11100169	Ser	GGA
                   c      GCCA gatgcaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAATCCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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