The detailed information of tRNA gene sequence


Sequence ID>WENV11102063
Genome IDAGFT01061052
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 105
End posion on genome 13
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctctaggc
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACGGTGTCAAGCC
GTACCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
ctttttccat
Secondary structure (Cloverleaf model)
>WENV11102063	Ser	GCT
                   c      GCCA ctttttccat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACGGTGTCAAGCCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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