The detailed information of tRNA gene sequence


Sequence ID>WENV11102131
Genome IDAGFT01094037
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 278
End posion on genome 364
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
accagcttat
tRNA gene sequence 
GGAGAGTTGACAGAGCGGTTTATTGTGATCGGTTGCTAACTGATTGTAGCTTAATAGCTA
CCAAGAGTTCGAATCTCTTACTCTCCTttt
Downstream region at tRNA end position 
gtgcatctcg
Secondary structure (Cloverleaf model)
>WENV11102131	Pseudo	GCT
                   t      Tttt gtgcatctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C T C     A
      C G A        G      | | | | |     G
    G       G A C A       A A G A G     C
    G       + | | |                 T T
    T       T T G T
      T T A        G     TGTAGCTTAATAGCTACC
                    A - T
                    T - A
                    C - G
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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