The detailed information of tRNA gene sequence


Sequence ID>C11100477
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 108082
End posion on genome 108158
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaccctcac
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCAGCGGAATCATAATCCGCGTGTCCGGGGTTCGAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>C11100477	Met	CAT
                   c      ACCA ataaaaacaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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