The detailed information of tRNA gene sequence


Sequence ID>C11100490
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 1440569
End posion on genome 1440644
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgtctggttg
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTCGGCTTTACACGCCGAATGTCGGGGGTTCGAGC
CCCTCATCGCCCACCA
Downstream region at tRNA end position 
aaaacatcgc
Secondary structure (Cloverleaf model)
>C11100490	Val	TAC
                   g      ACCA aaaacatcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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