The detailed information of tRNA gene sequence


Sequence ID>C11100494
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 1891530
End posion on genome 1891606
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tggtgtccgg
tRNA gene sequence 
GCGCCCATAGCTCAACCGGATAGAGCAACGGCCTTCTAAGCCGTAGGTTGCAGGTTCGAT
TCCTGCTGGGCGCGCCA
Downstream region at tRNA end position 
atcaaaacag
Secondary structure (Cloverleaf model)
>C11100494	Arg	TCT
                   g      GCCA atcaaaacag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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