The detailed information of tRNA gene sequence


Sequence ID>C11100495
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 2240110
End posion on genome 2240185
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcgtgtccg
tRNA gene sequence 
GTCCCCATCGTCTAGCGGCCTAGGACACCGCCCTTTCACGGCGGTAACGGGGGTTCGAAC
CCCCCTGGGGACGCCA
Downstream region at tRNA end position 
cttctggttt
Secondary structure (Cloverleaf model)
>C11100495	Glu	TTC
                   g      GCCA cttctggttt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     C C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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