The detailed information of tRNA gene sequence


Sequence ID>C11100501
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 2840264
End posion on genome 2840188
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtagcgactt
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGCTAGAGCACACGACTGATAATCGTGAGGTCAGTGGTTCGAG
TCCACTTGGGCCCACCA
Downstream region at tRNA end position 
catggggctg
Secondary structure (Cloverleaf model)
>C11100501	Ile	GAT
                   t      ACCA catggggctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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