The detailed information of tRNA gene sequence


Sequence ID>C11100506
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 2528230
End posion on genome 2528155
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccaccacat
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTCACCGGTTCGAGA
CCGGTCAGCTCCACCA
Downstream region at tRNA end position 
gacggtgggg
Secondary structure (Cloverleaf model)
>C11100506	Ala	TGC
                   t      ACCA gacggtgggg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          A G
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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