The detailed information of tRNA gene sequence


Sequence ID>C11100508
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 2320167
End posion on genome 2320091
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggcgtttc
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGTCAGAGCAGGGGACTCATAATCCTTTGGTCGCGGGTTCAAA
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tataaaacag
Secondary structure (Cloverleaf model)
>C11100508	Met	CAT
                   c      ACCA tataaaacag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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