The detailed information of tRNA gene sequence


Sequence ID>C11100514
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 1308823
End posion on genome 1308748
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttcacgcctc
tRNA gene sequence 
GGGTTGTTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCGTGGGTTCGATC
CCCTCACAACCCACCA
Downstream region at tRNA end position 
tgttttcaat
Secondary structure (Cloverleaf model)
>C11100514	Lys	CTT
                   c      ACCA tgttttcaat
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          C T
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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