The detailed information of tRNA gene sequence


Sequence ID>C11100516
Genome IDCP002573
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus caldus SM-1 [CP002573]
Start position on genome 972773
End posion on genome 972689
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tagcgtaaag
tRNA gene sequence 
GCGAGAGTGGCGGAATTGGTAGACGCACTGGATTTAGGTTCCAGCGCCGCAAGGCGTGGG
AGTTCGAGTCTCCCCTTTCGCACCA
Downstream region at tRNA end position 
tccatgagat
Secondary structure (Cloverleaf model)
>C11100516	Leu	TAG
                   g      ACCA tccatgagat
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C          T G
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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