The detailed information of tRNA gene sequence


Sequence ID>C11100665
Genome IDCP002657
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesAlicycliphilus denitrificans K601 [CP002657]
Start position on genome 1225306
End posion on genome 1225217
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcacggaagc
tRNA gene sequence 
GGTGGGTTGGCCGAGCGGTTGAAGGCACTAGTCTTGAAAACTAGCAAGGGGGTCACCCCT
TCCAGGGTTCGAATCCCTGACCCACCGCCA
Downstream region at tRNA end position 
atttcgtgga
Secondary structure (Cloverleaf model)
>C11100665	Ser	TGA
                   c      GCCA atttcgtgga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CAAGGGGGTCACCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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