The detailed information of tRNA gene sequence


Sequence ID>C11100703
Genome IDCP002396
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAsticcacaulis excentricus CB 48 [CP002395, CP002396]
Start position on genome 860052
End posion on genome 859961
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccttagtgc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCGTACCCCTAAAAGGG
TACCATGGGTTCGAATCCCATCGTCTCCGCCA
Downstream region at tRNA end position 
tcaaacaaaa
Secondary structure (Cloverleaf model)
>C11100703	Ser	GCT
                   c      GCCA tcaaacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACCCCTAAAAGGGTACC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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