The detailed information of tRNA gene sequence


Sequence ID>C11100931
Genome IDCP002896
Search identical group
Phylum/ClassActinomycetota
SpeciesAmycolatopsis mediterranei S699 [CP002896]
Start position on genome 5679032
End posion on genome 5678938
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catggtgcag
tRNA gene sequence 
GGAGGCGTATCCGGCCTGGTGACCGGCGCGGTCTTCAAAACCGTCGAACGGCAGGTTCTG
CCGCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
tgcctgaccc
Secondary structure (Cloverleaf model)
>C11100931	SeC	TCA
                   g      GCCA tgcctgaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      T C C        T      + | | | |     G
    G       G G C C       G C G G G     C
    G       | | | |                 T T
    T       C C G G
      G A          C     CGAACGGCAGGTTCTGCCGCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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