The detailed information of tRNA gene sequence


Sequence ID>C11100980
Genome IDAP012035
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidiphilium multivorum AIU301 [AP012035]
Start position on genome 301644
End posion on genome 301555
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgcggctgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATTGGGACGGTCTCGAAAACCGTTGTGCCTTCACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcgcctt
Secondary structure (Cloverleaf model)
>C11100980	Ser	CGA
                   c      GCCA gtttcgcctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGTGCCTTCACGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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