The detailed information of tRNA gene sequence


Sequence ID>W11200091
Genome IDAFGF01000040
Search identical group
Phylum/ClassBacillota
SpeciesAcetonema longum DSM 6540 [AFGF]
Start position on genome 48931
End posion on genome 49028
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
acagaatctt
tRNA gene sequence 
GGGGGTGGATGGAACCTGGTGGTTTCTGCAGTCTTCAAAACTGTTTGTGGGGCAGTATTC
CTGTCCTTGGTGGGTTCGATTCCTACACGCCCTCGCCA
Downstream region at tRNA end position 
gcaagaaatt
Secondary structure (Cloverleaf model)
>W11200091	seC	TCA
                   t      GCCA gcaagaaatt
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G   A          T T
                    A     C A T C C     A
      T C C        T      | | + | |     G
    G       A A G G       G T G G G     C
    G       | | + |                 T T
    T       T T T C
      G G          T     TTGTGGGGCAGTATTCCTGTCCTTG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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