The detailed information of tRNA gene sequence


Sequence ID>C11101305
Genome IDAP012029
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolinea thermophila UNI-1 [AP012029]
Start position on genome 3526560
End posion on genome 3526470
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgctcgttc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCGATCGGGGCGGTCTCGAAAACCGTTGTGGTCCTTTGGGCC
ACCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
ttttttggaa
Secondary structure (Cloverleaf model)
>C11101305	Ser	CGA
                   c      GCCT ttttttggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTGGTCCTTTGGGCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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