The detailed information of tRNA gene sequence


Sequence ID>C11101307
Genome IDAP012029
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolinea thermophila UNI-1 [AP012029]
Start position on genome 3073989
End posion on genome 3073894
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcttaacggc
tRNA gene sequence 
GGGGATGGCTGAGTCCCGGTGGGCTTCACGGTCTTCAAAACCGCTGACGGGTCGCGTGGC
GAGCCGTGGTGGGTTCGACTCCCATCCATCCCCGCCt
Downstream region at tRNA end position 
tttcttttat
Secondary structure (Cloverleaf model)
>C11101307	SeC	TCA
                   c      GCCt tttcttttat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          C     TGACGGGTCGCGTGGCGAGCCGTG
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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